Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CROCCP3Q8IVE0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 AL160286.2-201ENST00000567150 934 ntBASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CROCCP3Q8IVE0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 AC007322.1-201ENST00000426983 750 ntBASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 KRT8P32-201ENST00000512863 1461 ntBASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CROCCP3Q8IVE0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms