Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LDB1Q86U70 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.86■□□□□ 0.45
LDB1Q86U70 LTB4R2-202ENST00000528054 3092 ntBASIC17.86■□□□□ 0.45
LDB1Q86U70 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
LDB1Q86U70 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LDB1Q86U70 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.86■□□□□ 0.45
LDB1Q86U70 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.86■□□□□ 0.45
LDB1Q86U70 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.86■□□□□ 0.45
LDB1Q86U70 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.86■□□□□ 0.45
LDB1Q86U70 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
LDB1Q86U70 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.86■□□□□ 0.45
LDB1Q86U70 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.86■□□□□ 0.45
LDB1Q86U70 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
LDB1Q86U70 AL353692.3-201ENST00000407031 1396 ntBASIC17.86■□□□□ 0.45
LDB1Q86U70 KRT8P47-201ENST00000604727 1398 ntBASIC17.86■□□□□ 0.45
LDB1Q86U70 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LDB1Q86U70 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 AC009949.1-201ENST00000623048 1830 ntBASIC17.86■□□□□ 0.45
LDB1Q86U70 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LDB1Q86U70 AL355312.1-201ENST00000407115 2176 ntBASIC17.86■□□□□ 0.45
LDB1Q86U70 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
LDB1Q86U70 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.85■□□□□ 0.45
LDB1Q86U70 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LDB1Q86U70 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LDB1Q86U70 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LDB1Q86U70 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.85■□□□□ 0.45
LDB1Q86U70 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LDB1Q86U70 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.85■□□□□ 0.45
LDB1Q86U70 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 TSPY12P-201ENST00000421279 868 ntBASIC17.85■□□□□ 0.45
LDB1Q86U70 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 KRT18P65-201ENST00000439811 1286 ntBASIC17.85■□□□□ 0.45
LDB1Q86U70 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.85■□□□□ 0.45
LDB1Q86U70 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.85■□□□□ 0.45
LDB1Q86U70 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.85■□□□□ 0.45
LDB1Q86U70 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.85■□□□□ 0.45
LDB1Q86U70 AC022898.2-201ENST00000616822 1312 ntBASIC17.85■□□□□ 0.45
LDB1Q86U70 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.85■□□□□ 0.45
LDB1Q86U70 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.85■□□□□ 0.45
LDB1Q86U70 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LDB1Q86U70 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LDB1Q86U70 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 PP12613-201ENST00000424958 2230 ntBASIC17.84■□□□□ 0.45
LDB1Q86U70 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.84■□□□□ 0.45
LDB1Q86U70 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 Z83836.1-201ENST00000624605 1642 ntBASIC17.84■□□□□ 0.45
LDB1Q86U70 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.84■□□□□ 0.45
LDB1Q86U70 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.84■□□□□ 0.45
LDB1Q86U70 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.84■□□□□ 0.45
LDB1Q86U70 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
LDB1Q86U70 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.84■□□□□ 0.45
LDB1Q86U70 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.84■□□□□ 0.45
LDB1Q86U70 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LDB1Q86U70 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.84■□□□□ 0.45
LDB1Q86U70 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.84■□□□□ 0.45
LDB1Q86U70 GPR32P1-201ENST00000601788 811 ntBASIC17.84■□□□□ 0.45
LDB1Q86U70 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms