Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP1BQ7LBR1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP1BQ7LBR1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.52■□□□□ 0.23
CHMP1BQ7LBR1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CHMP1BQ7LBR1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.52■□□□□ 0.23
CHMP1BQ7LBR1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.52■□□□□ 0.23
CHMP1BQ7LBR1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.52■□□□□ 0.23
CHMP1BQ7LBR1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CHMP1BQ7LBR1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP1BQ7LBR1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP1BQ7LBR1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHMP1BQ7LBR1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 AL163051.1-201ENST00000569214 1512 ntBASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 AC090164.3-201ENST00000610780 2143 ntBASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 KRT18P48-201ENST00000434763 852 ntBASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP1BQ7LBR1 WIZP1-201ENST00000531444 2299 ntBASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 HLA-F-220ENST00000434407 884 ntBASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 BX276092.5-203ENST00000456199 560 ntBASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 AC008687.5-201ENST00000593746 558 ntBASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 AC079602.3-201ENST00000623931 403 ntBASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 MYLKP1-201ENST00000509077 1580 ntBASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP1BQ7LBR1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP1BQ7LBR1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms