Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
PACS1Q6VY07 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.08■□□□□ 0.48
PACS1Q6VY07 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.08■□□□□ 0.48
PACS1Q6VY07 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.08■□□□□ 0.48
PACS1Q6VY07 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
PACS1Q6VY07 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 PRORSD1P-202ENST00000563365 2154 ntBASIC18.08■□□□□ 0.48
PACS1Q6VY07 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.08■□□□□ 0.48
PACS1Q6VY07 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.08■□□□□ 0.48
PACS1Q6VY07 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
PACS1Q6VY07 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PACS1Q6VY07 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 FAM8A6P-201ENST00000407496 1135 ntBASIC18.07■□□□□ 0.48
PACS1Q6VY07 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 FAM210CP-201ENST00000445714 574 ntBASIC18.07■□□□□ 0.48
PACS1Q6VY07 DUX4L26-201ENST00000489078 1255 ntBASIC18.07■□□□□ 0.48
PACS1Q6VY07 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 AC079602.3-201ENST00000623931 403 ntBASIC18.07■□□□□ 0.48
PACS1Q6VY07 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 AL355312.1-201ENST00000407115 2176 ntBASIC18.07■□□□□ 0.48
PACS1Q6VY07 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PACS1Q6VY07 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PACS1Q6VY07 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 AC012313.1-201ENST00000593393 3059 ntBASIC18.06■□□□□ 0.48
PACS1Q6VY07 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 HLA-F-220ENST00000434407 884 ntBASIC18.06■□□□□ 0.48
PACS1Q6VY07 AC022616.7-201ENST00000525383 220 ntBASIC18.06■□□□□ 0.48
PACS1Q6VY07 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 AL136038.4-201ENST00000603606 1261 ntBASIC18.06■□□□□ 0.48
PACS1Q6VY07 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.06■□□□□ 0.48
PACS1Q6VY07 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PACS1Q6VY07 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PACS1Q6VY07 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PACS1Q6VY07 AL391807.1-203ENST00000604392 2365 ntBASIC18.05■□□□□ 0.48
PACS1Q6VY07 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms