Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 AL353593.2-201ENST00000602529 1483 ntBASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
LYSMD4Q5XG99 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 KLF4P1-201ENST00000412782 1185 ntBASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 CEND1P1-201ENST00000451006 455 ntBASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 SIGLEC30P-201ENST00000455569 941 ntBASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 AP002472.1-201ENST00000577490 586 ntBASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 AC004790.2-201ENST00000623588 572 ntBASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD4Q5XG99 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LYSMD4Q5XG99 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 ELL2P1-201ENST00000413990 1906 ntBASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 GPR89P-201ENST00000407924 1495 ntBASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 AL645939.2-201ENST00000427340 991 ntBASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 AC120498.9-201ENST00000339021 3867 ntBASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD4Q5XG99 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 AC132938.5-201ENST00000624980 1813 ntBASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 AC093010.1-201ENST00000473625 1624 ntBASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 AC148477.5-201ENST00000625164 1645 ntBASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 AC003669.1-201ENST00000334569 611 ntBASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD4Q5XG99 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms