Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.03■□□□□ 0.32
PRAMEF17Q5VTA0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 AC009533.2-201ENST00000543664 586 ntBASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRAMEF17Q5VTA0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEF17Q5VTA0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEF17Q5VTA0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.02■□□□□ 0.31
PRAMEF17Q5VTA0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEF17Q5VTA0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.02■□□□□ 0.31
PRAMEF17Q5VTA0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PRAMEF17Q5VTA0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEF17Q5VTA0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRAMEF17Q5VTA0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
PRAMEF17Q5VTA0 INTS4P1-201ENST00000438455 1935 ntBASIC17.02■□□□□ 0.31
PRAMEF17Q5VTA0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
PRAMEF17Q5VTA0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 AC026471.1-201ENST00000564629 3026 ntBASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 AL096828.2-201ENST00000567259 1965 ntBASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 AC148477.8-201ENST00000624298 468 ntBASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRAMEF17Q5VTA0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PRAMEF17Q5VTA0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17■□□□□ 0.31
PRAMEF17Q5VTA0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms