Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH17Q12864 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH17Q12864 AC104076.2-201ENST00000448912 469 ntBASIC18.08■□□□□ 0.48
CDH17Q12864 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH17Q12864 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.08■□□□□ 0.48
CDH17Q12864 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH17Q12864 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH17Q12864 HYMAI.1-201ENST00000620949 238 ntBASIC18.08■□□□□ 0.48
CDH17Q12864 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
CDH17Q12864 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH17Q12864 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH17Q12864 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH17Q12864 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH17Q12864 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH17Q12864 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CDH17Q12864 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH17Q12864 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH17Q12864 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CDH17Q12864 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH17Q12864 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH17Q12864 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH17Q12864 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.07■□□□□ 0.48
CDH17Q12864 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CDH17Q12864 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.07■□□□□ 0.48
CDH17Q12864 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 GPR32P1-201ENST00000601788 811 ntBASIC18.07■□□□□ 0.48
CDH17Q12864 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CDH17Q12864 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH17Q12864 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 AC009949.1-201ENST00000623048 1830 ntBASIC18.07■□□□□ 0.48
CDH17Q12864 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH17Q12864 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CDH17Q12864 LINC01311-201ENST00000565162 1445 ntBASIC18.06■□□□□ 0.48
CDH17Q12864 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 AL353692.3-201ENST00000407031 1396 ntBASIC18.06■□□□□ 0.48
CDH17Q12864 KRT8P47-201ENST00000604727 1398 ntBASIC18.06■□□□□ 0.48
CDH17Q12864 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.06■□□□□ 0.48
CDH17Q12864 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH17Q12864 DDX43P3-201ENST00000441064 443 ntBASIC18.06■□□□□ 0.48
CDH17Q12864 AC063952.2-201ENST00000498792 1227 ntBASIC18.06■□□□□ 0.48
CDH17Q12864 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
CDH17Q12864 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.06■□□□□ 0.48
CDH17Q12864 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH17Q12864 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.06■□□□□ 0.48
CDH17Q12864 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.06■□□□□ 0.48
CDH17Q12864 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH17Q12864 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH17Q12864 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH17Q12864 AC133963.1-201ENST00000504166 1679 ntBASIC18.06■□□□□ 0.48
CDH17Q12864 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH17Q12864 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH17Q12864 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDH17Q12864 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDH17Q12864 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH17Q12864 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH17Q12864 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.05■□□□□ 0.48
CDH17Q12864 VENTXP5-201ENST00000523979 775 ntBASIC18.05■□□□□ 0.48
CDH17Q12864 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH17Q12864 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms