Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC096582.2-201ENST00000510860 516 ntBASIC17.99■□□□□ 0.47
AP1S1P61966 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.99■□□□□ 0.47
AP1S1P61966 AC011467.2-201ENST00000598425 242 ntBASIC17.99■□□□□ 0.47
AP1S1P61966 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 AC114341.1-201ENST00000618070 349 ntBASIC17.99■□□□□ 0.47
AP1S1P61966 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.99■□□□□ 0.47
AP1S1P61966 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
AP1S1P61966 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
AP1S1P61966 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
AP1S1P61966 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP1S1P61966 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
AP1S1P61966 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.98■□□□□ 0.47
AP1S1P61966 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
AP1S1P61966 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 AC009949.1-201ENST00000623048 1830 ntBASIC17.98■□□□□ 0.47
AP1S1P61966 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
AP1S1P61966 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.98■□□□□ 0.47
AP1S1P61966 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
AP1S1P61966 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.98■□□□□ 0.47
AP1S1P61966 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.98■□□□□ 0.47
AP1S1P61966 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 TP73-AS1-210ENST00000637775 1455 ntBASIC17.98■□□□□ 0.47
AP1S1P61966 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
AP1S1P61966 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.98■□□□□ 0.47
AP1S1P61966 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.98■□□□□ 0.47
AP1S1P61966 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.98■□□□□ 0.47
AP1S1P61966 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.98■□□□□ 0.47
AP1S1P61966 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.98■□□□□ 0.47
AP1S1P61966 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
AP1S1P61966 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
AP1S1P61966 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
AP1S1P61966 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.97■□□□□ 0.47
AP1S1P61966 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
AP1S1P61966 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.97■□□□□ 0.47
AP1S1P61966 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.97■□□□□ 0.47
AP1S1P61966 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
AP1S1P61966 AC007967.3-201ENST00000434308 558 ntBASIC17.97■□□□□ 0.47
AP1S1P61966 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.97■□□□□ 0.47
AP1S1P61966 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.97■□□□□ 0.47
AP1S1P61966 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.97■□□□□ 0.47
AP1S1P61966 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 AC138894.3-201ENST00000603787 634 ntBASIC17.97■□□□□ 0.47
AP1S1P61966 AL121772.3-201ENST00000610840 674 ntBASIC17.97■□□□□ 0.47
AP1S1P61966 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP1S1P61966 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.97■□□□□ 0.47
AP1S1P61966 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.97■□□□□ 0.47
AP1S1P61966 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.97■□□□□ 0.47
AP1S1P61966 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
AP1S1P61966 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.96■□□□□ 0.47
AP1S1P61966 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
AP1S1P61966 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.96■□□□□ 0.47
AP1S1P61966 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
AP1S1P61966 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.96■□□□□ 0.47
AP1S1P61966 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 FAM220CP-201ENST00000395253 831 ntBASIC17.96■□□□□ 0.47
AP1S1P61966 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S1P61966 NUS1P2-201ENST00000417358 873 ntBASIC17.96■□□□□ 0.47
AP1S1P61966 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms