Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.62■□□□□ 0.41
SRP54P61011 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP54P61011 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.62■□□□□ 0.41
SRP54P61011 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SRP54P61011 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP54P61011 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
SRP54P61011 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.62■□□□□ 0.41
SRP54P61011 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP54P61011 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.62■□□□□ 0.41
SRP54P61011 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP54P61011 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRP54P61011 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP54P61011 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.62■□□□□ 0.41
SRP54P61011 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRP54P61011 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.61■□□□□ 0.41
SRP54P61011 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 BCL2-203ENST00000589955 5011 ntBASIC17.61■□□□□ 0.41
SRP54P61011 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SRP54P61011 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
SRP54P61011 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.61■□□□□ 0.41
SRP54P61011 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.61■□□□□ 0.41
SRP54P61011 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.61■□□□□ 0.41
SRP54P61011 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SRP54P61011 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.61■□□□□ 0.41
SRP54P61011 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.61■□□□□ 0.41
SRP54P61011 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.61■□□□□ 0.41
SRP54P61011 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 AC064862.7-201ENST00000604520 867 ntBASIC17.61■□□□□ 0.41
SRP54P61011 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.61■□□□□ 0.41
SRP54P61011 TP73-AS1-207ENST00000624167 988 ntBASIC17.61■□□□□ 0.41
SRP54P61011 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.61■□□□□ 0.41
SRP54P61011 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SRP54P61011 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.61■□□□□ 0.41
SRP54P61011 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.61■□□□□ 0.41
SRP54P61011 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRP54P61011 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.61■□□□□ 0.41
SRP54P61011 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SRP54P61011 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SRP54P61011 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SRP54P61011 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.6■□□□□ 0.41
SRP54P61011 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 FAM197Y8-203ENST00000450145 560 ntBASIC17.6■□□□□ 0.41
SRP54P61011 AC079776.4-201ENST00000511039 504 ntBASIC17.6■□□□□ 0.41
SRP54P61011 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.6■□□□□ 0.41
SRP54P61011 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.6■□□□□ 0.41
SRP54P61011 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.6■□□□□ 0.41
SRP54P61011 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SRP54P61011 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.6■□□□□ 0.41
SRP54P61011 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SRP54P61011 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.6■□□□□ 0.41
SRP54P61011 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.6■□□□□ 0.41
SRP54P61011 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.6■□□□□ 0.41
SRP54P61011 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.6■□□□□ 0.41
SRP54P61011 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
SRP54P61011 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRP54P61011 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.6■□□□□ 0.41
SRP54P61011 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRP54P61011 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SRP54P61011 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.59■□□□□ 0.41
SRP54P61011 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.59■□□□□ 0.41
SRP54P61011 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.59■□□□□ 0.41
SRP54P61011 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SRP54P61011 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRP54P61011 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRP54P61011 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms