Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLDN2P57739 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN2P57739 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLDN2P57739 MIR574-201ENST00000385209 96 ntBASIC17.61■□□□□ 0.41
CLDN2P57739 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN2P57739 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN2P57739 AC096633.1-201ENST00000422446 749 ntBASIC17.61■□□□□ 0.41
CLDN2P57739 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN2P57739 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 DUTP2-201ENST00000519164 463 ntBASIC17.61■□□□□ 0.41
CLDN2P57739 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CLDN2P57739 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 AC116407.3-201ENST00000623905 1129 ntBASIC17.61■□□□□ 0.41
CLDN2P57739 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN2P57739 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN2P57739 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLDN2P57739 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN2P57739 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CLDN2P57739 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLDN2P57739 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN2P57739 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CLDN2P57739 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN2P57739 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN2P57739 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLDN2P57739 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CLDN2P57739 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN2P57739 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN2P57739 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.6■□□□□ 0.41
CLDN2P57739 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.6■□□□□ 0.41
CLDN2P57739 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN2P57739 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN2P57739 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN2P57739 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN2P57739 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN2P57739 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN2P57739 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 AP000867.4-201ENST00000641616 219 ntBASIC17.6■□□□□ 0.41
CLDN2P57739 AC022898.2-201ENST00000616822 1312 ntBASIC17.6■□□□□ 0.41
CLDN2P57739 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CLDN2P57739 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN2P57739 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLDN2P57739 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN2P57739 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN2P57739 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLDN2P57739 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CLDN2P57739 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLDN2P57739 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN2P57739 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLDN2P57739 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN2P57739 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN2P57739 RPS2P28-201ENST00000314255 741 ntBASIC17.59■□□□□ 0.41
CLDN2P57739 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN2P57739 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.59■□□□□ 0.41
CLDN2P57739 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLDN2P57739 RPL13AP23-201ENST00000480739 586 ntBASIC17.59■□□□□ 0.41
CLDN2P57739 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN2P57739 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN2P57739 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN2P57739 AC025062.2-201ENST00000605477 670 ntBASIC17.59■□□□□ 0.41
CLDN2P57739 AC023511.2-201ENST00000618803 211 ntBASIC17.59■□□□□ 0.41
CLDN2P57739 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN2P57739 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN2P57739 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms