Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC106028.4-201ENST00000614509 607 ntBASIC19.6■□□□□ 0.73
ACLYP53396 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.6■□□□□ 0.73
ACLYP53396 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ACLYP53396 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ACLYP53396 AC116562.4-201ENST00000641316 2276 ntBASIC19.6■□□□□ 0.73
ACLYP53396 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ACLYP53396 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACLYP53396 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.6■□□□□ 0.73
ACLYP53396 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.6■□□□□ 0.73
ACLYP53396 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ACLYP53396 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACLYP53396 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ACLYP53396 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
ACLYP53396 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACLYP53396 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.59■□□□□ 0.73
ACLYP53396 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACLYP53396 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ACLYP53396 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
ACLYP53396 AC003669.1-201ENST00000334569 611 ntBASIC19.59■□□□□ 0.73
ACLYP53396 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.59■□□□□ 0.73
ACLYP53396 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.59■□□□□ 0.73
ACLYP53396 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.59■□□□□ 0.73
ACLYP53396 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.59■□□□□ 0.73
ACLYP53396 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ACLYP53396 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.59■□□□□ 0.73
ACLYP53396 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
ACLYP53396 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.59■□□□□ 0.73
ACLYP53396 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.59■□□□□ 0.73
ACLYP53396 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
ACLYP53396 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.59■□□□□ 0.73
ACLYP53396 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.59■□□□□ 0.73
ACLYP53396 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ACLYP53396 AL031432.2-201ENST00000566714 459 ntBASIC19.59■□□□□ 0.73
ACLYP53396 AL928711.1-201ENST00000570165 459 ntBASIC19.59■□□□□ 0.73
ACLYP53396 AC010654.1-201ENST00000615722 808 ntBASIC19.59■□□□□ 0.73
ACLYP53396 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.59■□□□□ 0.73
ACLYP53396 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.59■□□□□ 0.73
ACLYP53396 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACLYP53396 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.59■□□□□ 0.73
ACLYP53396 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ACLYP53396 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.59■□□□□ 0.73
ACLYP53396 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.59■□□□□ 0.73
ACLYP53396 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACLYP53396 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACLYP53396 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ACLYP53396 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACLYP53396 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
ACLYP53396 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ACLYP53396 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ACLYP53396 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.58■□□□□ 0.73
ACLYP53396 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.58■□□□□ 0.73
ACLYP53396 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ACLYP53396 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ACLYP53396 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.58■□□□□ 0.73
ACLYP53396 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ACLYP53396 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ACLYP53396 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.58■□□□□ 0.72
ACLYP53396 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ACLYP53396 MRPL20P1-201ENST00000400819 433 ntBASIC19.58■□□□□ 0.72
ACLYP53396 FAM8A3P-201ENST00000427218 844 ntBASIC19.58■□□□□ 0.72
ACLYP53396 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.58■□□□□ 0.72
ACLYP53396 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.58■□□□□ 0.72
ACLYP53396 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.58■□□□□ 0.72
ACLYP53396 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.58■□□□□ 0.72
ACLYP53396 PDPK2P-202ENST00000562415 1191 ntBASIC19.58■□□□□ 0.72
ACLYP53396 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ACLYP53396 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.58■□□□□ 0.72
ACLYP53396 AC092364.2-202ENST00000597012 1073 ntBASIC19.58■□□□□ 0.72
ACLYP53396 AC027612.4-201ENST00000605371 583 ntBASIC19.58■□□□□ 0.72
ACLYP53396 AC004877.2-201ENST00000623941 599 ntBASIC19.58■□□□□ 0.72
ACLYP53396 AL805961.1-202ENST00000641562 540 ntBASIC19.58■□□□□ 0.72
ACLYP53396 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ACLYP53396 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ACLYP53396 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.58■□□□□ 0.72
ACLYP53396 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ACLYP53396 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ACLYP53396 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.58■□□□□ 0.72
ACLYP53396 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ACLYP53396 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ACLYP53396 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ACLYP53396 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACLYP53396 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ACLYP53396 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ACLYP53396 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACLYP53396 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ACLYP53396 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.57■□□□□ 0.72
ACLYP53396 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
ACLYP53396 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ACLYP53396 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.57■□□□□ 0.72
ACLYP53396 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACLYP53396 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ACLYP53396 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.57■□□□□ 0.72
ACLYP53396 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.57■□□□□ 0.72
ACLYP53396 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACLYP53396 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACLYP53396 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.57■□□□□ 0.72
ACLYP53396 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACLYP53396 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.57■□□□□ 0.72
ACLYP53396 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.57■□□□□ 0.72
ACLYP53396 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms