Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCR9P51686 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCR9P51686 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CCR9P51686 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.77■□□□□ 0.11
CCR9P51686 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.76■□□□□ 0.11
CCR9P51686 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCR9P51686 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.76■□□□□ 0.11
CCR9P51686 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.76■□□□□ 0.11
CCR9P51686 AL121761.2-201ENST00000598007 1648 ntBASIC15.76■□□□□ 0.11
CCR9P51686 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CCR9P51686 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CCR9P51686 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 AC007663.1-201ENST00000438948 1240 ntBASIC15.76■□□□□ 0.11
CCR9P51686 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.76■□□□□ 0.11
CCR9P51686 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.76■□□□□ 0.11
CCR9P51686 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.76■□□□□ 0.11
CCR9P51686 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.76■□□□□ 0.11
CCR9P51686 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCR9P51686 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.76■□□□□ 0.11
CCR9P51686 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CCR9P51686 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCR9P51686 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.76■□□□□ 0.11
CCR9P51686 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CCR9P51686 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CCR9P51686 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.76■□□□□ 0.11
CCR9P51686 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.76■□□□□ 0.11
CCR9P51686 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCR9P51686 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.76■□□□□ 0.11
CCR9P51686 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.75■□□□□ 0.11
CCR9P51686 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CCR9P51686 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.75■□□□□ 0.11
CCR9P51686 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.75■□□□□ 0.11
CCR9P51686 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.75■□□□□ 0.11
CCR9P51686 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CCR9P51686 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 GCSHP5-201ENST00000443090 522 ntBASIC15.75■□□□□ 0.11
CCR9P51686 RBM17P1-201ENST00000453646 1190 ntBASIC15.75■□□□□ 0.11
CCR9P51686 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.75■□□□□ 0.11
CCR9P51686 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.75■□□□□ 0.11
CCR9P51686 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.75■□□□□ 0.11
CCR9P51686 FITM1-202ENST00000559294 800 ntBASIC15.75■□□□□ 0.11
CCR9P51686 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.75■□□□□ 0.11
CCR9P51686 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCR9P51686 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCR9P51686 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.75■□□□□ 0.11
CCR9P51686 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.75■□□□□ 0.11
CCR9P51686 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.75■□□□□ 0.11
CCR9P51686 AC018695.7-201ENST00000624587 2492 ntBASIC15.75■□□□□ 0.11
CCR9P51686 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCR9P51686 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.75■□□□□ 0.11
CCR9P51686 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.75■□□□□ 0.11
CCR9P51686 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCR9P51686 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CCR9P51686 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CCR9P51686 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCR9P51686 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCR9P51686 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCR9P51686 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.74■□□□□ 0.11
CCR9P51686 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CCR9P51686 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CCR9P51686 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CCR9P51686 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCR9P51686 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.74■□□□□ 0.11
CCR9P51686 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
CCR9P51686 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCR9P51686 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCR9P51686 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCR9P51686 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms