Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
MTHFRP42898 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MTHFRP42898 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MTHFRP42898 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
MTHFRP42898 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.67■□□□□ 0.58
MTHFRP42898 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MTHFRP42898 LINC01126-201ENST00000623515 1646 ntBASIC18.67■□□□□ 0.58
MTHFRP42898 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.66■□□□□ 0.58
MTHFRP42898 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.66■□□□□ 0.58
MTHFRP42898 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
MTHFRP42898 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MTHFRP42898 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.66■□□□□ 0.58
MTHFRP42898 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.66■□□□□ 0.58
MTHFRP42898 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MTHFRP42898 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MTHFRP42898 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.66■□□□□ 0.58
MTHFRP42898 MCCD1P2-201ENST00000423228 335 ntBASIC18.66■□□□□ 0.58
MTHFRP42898 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.66■□□□□ 0.58
MTHFRP42898 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.66■□□□□ 0.58
MTHFRP42898 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
MTHFRP42898 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.66■□□□□ 0.58
MTHFRP42898 AC005829.1-201ENST00000570002 483 ntBASIC18.66■□□□□ 0.58
MTHFRP42898 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MTHFRP42898 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.65■□□□□ 0.58
MTHFRP42898 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.65■□□□□ 0.58
MTHFRP42898 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.65■□□□□ 0.58
MTHFRP42898 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.65■□□□□ 0.58
MTHFRP42898 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.65■□□□□ 0.58
MTHFRP42898 AC007967.3-201ENST00000434308 558 ntBASIC18.65■□□□□ 0.58
MTHFRP42898 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.65■□□□□ 0.58
MTHFRP42898 PRYP5-201ENST00000451909 266 ntBASIC18.65■□□□□ 0.58
MTHFRP42898 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.65■□□□□ 0.58
MTHFRP42898 AC136632.2-201ENST00000512891 861 ntBASIC18.65■□□□□ 0.58
MTHFRP42898 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.65■□□□□ 0.58
MTHFRP42898 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.65■□□□□ 0.58
MTHFRP42898 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.65■□□□□ 0.58
MTHFRP42898 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.65■□□□□ 0.58
MTHFRP42898 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.65■□□□□ 0.58
MTHFRP42898 AL596442.2-201ENST00000610240 980 ntBASIC18.65■□□□□ 0.58
MTHFRP42898 AC073592.4-201ENST00000623827 446 ntBASIC18.65■□□□□ 0.58
MTHFRP42898 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.65■□□□□ 0.58
MTHFRP42898 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MTHFRP42898 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MTHFRP42898 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
MTHFRP42898 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
MTHFRP42898 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MTHFRP42898 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.65■□□□□ 0.58
MTHFRP42898 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MTHFRP42898 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.65■□□□□ 0.58
MTHFRP42898 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.64■□□□□ 0.58
MTHFRP42898 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.64■□□□□ 0.58
MTHFRP42898 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MTHFRP42898 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.64■□□□□ 0.57
MTHFRP42898 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MTHFRP42898 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.64■□□□□ 0.57
MTHFRP42898 METTL21AP1-201ENST00000438852 635 ntBASIC18.64■□□□□ 0.57
MTHFRP42898 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.64■□□□□ 0.57
MTHFRP42898 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms