Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 TSPY5P-201ENST00000426936 936 ntBASIC18.13■□□□□ 0.49
GRIA1P42261 KRT18P48-201ENST00000434763 852 ntBASIC18.13■□□□□ 0.49
GRIA1P42261 KRT18P65-201ENST00000439811 1286 ntBASIC18.13■□□□□ 0.49
GRIA1P42261 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.13■□□□□ 0.49
GRIA1P42261 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
GRIA1P42261 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.13■□□□□ 0.49
GRIA1P42261 HYMAI.1-201ENST00000620949 238 ntBASIC18.13■□□□□ 0.49
GRIA1P42261 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
GRIA1P42261 LINC00304-203ENST00000565008 1864 ntBASIC18.13■□□□□ 0.49
GRIA1P42261 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.13■□□□□ 0.49
GRIA1P42261 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GRIA1P42261 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
GRIA1P42261 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GRIA1P42261 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GRIA1P42261 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
GRIA1P42261 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 AC104076.2-201ENST00000448912 469 ntBASIC18.12■□□□□ 0.49
GRIA1P42261 AL359075.1-203ENST00000462729 1002 ntBASIC18.12■□□□□ 0.49
GRIA1P42261 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.12■□□□□ 0.49
GRIA1P42261 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.12■□□□□ 0.49
GRIA1P42261 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
GRIA1P42261 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
GRIA1P42261 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
GRIA1P42261 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.12■□□□□ 0.49
GRIA1P42261 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.12■□□□□ 0.49
GRIA1P42261 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.12■□□□□ 0.49
GRIA1P42261 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GRIA1P42261 SIRPAP1-201ENST00000448467 1770 ntBASIC18.12■□□□□ 0.49
GRIA1P42261 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
GRIA1P42261 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.12■□□□□ 0.49
GRIA1P42261 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
GRIA1P42261 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GRIA1P42261 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
GRIA1P42261 HBZP1-201ENST00000354915 429 ntBASIC18.11■□□□□ 0.49
GRIA1P42261 RNF152P1-201ENST00000397754 604 ntBASIC18.11■□□□□ 0.49
GRIA1P42261 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.11■□□□□ 0.49
GRIA1P42261 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.11■□□□□ 0.49
GRIA1P42261 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.11■□□□□ 0.49
GRIA1P42261 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.11■□□□□ 0.49
GRIA1P42261 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.11■□□□□ 0.49
GRIA1P42261 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 AC133963.1-201ENST00000504166 1679 ntBASIC18.11■□□□□ 0.49
GRIA1P42261 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GRIA1P42261 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GRIA1P42261 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GRIA1P42261 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.1■□□□□ 0.49
GRIA1P42261 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GRIA1P42261 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GRIA1P42261 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIA1P42261 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GRIA1P42261 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.1■□□□□ 0.49
GRIA1P42261 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GRIA1P42261 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIA1P42261 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
GRIA1P42261 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIA1P42261 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GRIA1P42261 MIR662-201ENST00000384847 95 ntBASIC18.1■□□□□ 0.49
GRIA1P42261 AK4P3-201ENST00000418260 669 ntBASIC18.1■□□□□ 0.49
GRIA1P42261 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.1■□□□□ 0.49
GRIA1P42261 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.1■□□□□ 0.49
GRIA1P42261 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.1■□□□□ 0.49
GRIA1P42261 VENTXP5-201ENST00000523979 775 ntBASIC18.1■□□□□ 0.49
GRIA1P42261 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.1■□□□□ 0.49
GRIA1P42261 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms