Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SLC6A4P31645 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC6A4P31645 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC6A4P31645 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.33■□□□□ 0.52
SLC6A4P31645 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
SLC6A4P31645 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC6A4P31645 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC6A4P31645 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SLC6A4P31645 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC6A4P31645 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SLC6A4P31645 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SLC6A4P31645 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC6A4P31645 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A4P31645 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SLC6A4P31645 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC6A4P31645 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC6A4P31645 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC6A4P31645 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SLC6A4P31645 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SLC6A4P31645 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC6A4P31645 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.32■□□□□ 0.52
SLC6A4P31645 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC6A4P31645 FAM220CP-201ENST00000395253 831 ntBASIC18.32■□□□□ 0.52
SLC6A4P31645 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC6A4P31645 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC6A4P31645 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.32■□□□□ 0.52
SLC6A4P31645 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
SLC6A4P31645 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.32■□□□□ 0.52
SLC6A4P31645 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SLC6A4P31645 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC6A4P31645 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SLC6A4P31645 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC6A4P31645 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A4P31645 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A4P31645 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A4P31645 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC6A4P31645 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A4P31645 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A4P31645 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A4P31645 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A4P31645 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC6A4P31645 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A4P31645 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC6A4P31645 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A4P31645 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A4P31645 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A4P31645 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SLC6A4P31645 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC6A4P31645 AL121912.1-201ENST00000603683 238 ntBASIC18.31■□□□□ 0.52
SLC6A4P31645 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SLC6A4P31645 KRT18P55-202ENST00000578578 1546 ntBASIC18.31■□□□□ 0.52
SLC6A4P31645 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC6A4P31645 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A4P31645 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A4P31645 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A4P31645 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A4P31645 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A4P31645 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC6A4P31645 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A4P31645 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A4P31645 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A4P31645 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC6A4P31645 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC6A4P31645 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC6A4P31645 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A4P31645 AC009078.2-202ENST00000463353 338 ntBASIC18.3■□□□□ 0.52
SLC6A4P31645 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms