Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RAB4AP20338 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB4AP20338 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB4AP20338 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB4AP20338 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
RAB4AP20338 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RAB4AP20338 KRT18P11-201ENST00000435214 1283 ntBASIC13.73□□□□□ -0.21
RAB4AP20338 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB4AP20338 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB4AP20338 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RAB4AP20338 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB4AP20338 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 AC138028.4-201ENST00000564984 1845 ntBASIC13.73□□□□□ -0.21
RAB4AP20338 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.73□□□□□ -0.21
RAB4AP20338 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
RAB4AP20338 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB4AP20338 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB4AP20338 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RAB4AP20338 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.73□□□□□ -0.21
RAB4AP20338 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RAB4AP20338 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RAB4AP20338 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.72□□□□□ -0.21
RAB4AP20338 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
RAB4AP20338 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB4AP20338 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.72□□□□□ -0.21
RAB4AP20338 AC008694.1-202ENST00000636953 945 ntBASIC13.72□□□□□ -0.21
RAB4AP20338 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RAB4AP20338 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
RAB4AP20338 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 AP001094.4-201ENST00000579008 2176 ntBASIC13.72□□□□□ -0.21
RAB4AP20338 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.72□□□□□ -0.21
RAB4AP20338 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RAB4AP20338 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RAB4AP20338 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RAB4AP20338 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RAB4AP20338 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.71□□□□□ -0.21
RAB4AP20338 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RAB4AP20338 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB4AP20338 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms