Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
HOXC6P09630 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.1■□□□□ 0.81
HOXC6P09630 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC6P09630 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.1■□□□□ 0.81
HOXC6P09630 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC6P09630 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC6P09630 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC6P09630 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC6P09630 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC6P09630 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HOXC6P09630 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.1■□□□□ 0.81
HOXC6P09630 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC6P09630 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXC6P09630 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXC6P09630 AC006504.4-201ENST00000592118 1568 ntBASIC20.09■□□□□ 0.81
HOXC6P09630 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC6P09630 TNXA-203ENST00000507684 2038 ntBASIC20.09■□□□□ 0.81
HOXC6P09630 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC6P09630 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC6P09630 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC6P09630 CRYGEP-201ENST00000412192 528 ntBASIC20.09■□□□□ 0.81
HOXC6P09630 PRSS29P-201ENST00000440800 595 ntBASIC20.09■□□□□ 0.81
HOXC6P09630 VN2R19P-201ENST00000442399 1052 ntBASIC20.09■□□□□ 0.81
HOXC6P09630 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC6P09630 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXC6P09630 IGHV3-65-201ENST00000523210 341 ntBASIC20.09■□□□□ 0.81
HOXC6P09630 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.09■□□□□ 0.81
HOXC6P09630 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.09■□□□□ 0.81
HOXC6P09630 MIR4469-201ENST00000583919 79 ntBASIC20.09■□□□□ 0.81
HOXC6P09630 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.09■□□□□ 0.81
HOXC6P09630 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXC6P09630 C20orf181-201ENST00000623918 480 ntBASIC20.09■□□□□ 0.81
HOXC6P09630 AC092865.6-201ENST00000642101 219 ntBASIC20.09■□□□□ 0.81
HOXC6P09630 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC6P09630 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC6P09630 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC6P09630 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXC6P09630 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXC6P09630 AC087289.5-201ENST00000586076 3175 ntBASIC20.09■□□□□ 0.81
HOXC6P09630 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.08■□□□□ 0.81
HOXC6P09630 AL049757.1-201ENST00000616842 1596 ntBASIC20.08■□□□□ 0.81
HOXC6P09630 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC6P09630 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC6P09630 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC6P09630 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC6P09630 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC6P09630 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
HOXC6P09630 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC6P09630 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC6P09630 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXC6P09630 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
HOXC6P09630 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.08■□□□□ 0.81
HOXC6P09630 HCG4B-203ENST00000450128 991 ntBASIC20.08■□□□□ 0.81
HOXC6P09630 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.08■□□□□ 0.81
HOXC6P09630 ALG1L5P-201ENST00000482043 771 ntBASIC20.08■□□□□ 0.81
HOXC6P09630 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
HOXC6P09630 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.08■□□□□ 0.81
HOXC6P09630 AC008667.4-201ENST00000607370 168 ntBASIC20.08■□□□□ 0.81
HOXC6P09630 AL596442.2-201ENST00000610240 980 ntBASIC20.08■□□□□ 0.81
HOXC6P09630 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
HOXC6P09630 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HOXC6P09630 AC132938.5-201ENST00000624980 1813 ntBASIC20.08■□□□□ 0.8
HOXC6P09630 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HOXC6P09630 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HOXC6P09630 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HOXC6P09630 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
HOXC6P09630 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.08■□□□□ 0.8
HOXC6P09630 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HOXC6P09630 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.08■□□□□ 0.8
HOXC6P09630 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXC6P09630 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC6P09630 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC6P09630 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC6P09630 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC6P09630 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC6P09630 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC6P09630 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC6P09630 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.07■□□□□ 0.8
HOXC6P09630 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HOXC6P09630 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXC6P09630 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
HOXC6P09630 AC108073.2-201ENST00000464002 357 ntBASIC20.07■□□□□ 0.8
HOXC6P09630 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXC6P09630 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.07■□□□□ 0.8
HOXC6P09630 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXC6P09630 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.07■□□□□ 0.8
HOXC6P09630 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
HOXC6P09630 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXC6P09630 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC6P09630 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC6P09630 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC6P09630 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
HOXC6P09630 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXC6P09630 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
HOXC6P09630 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC6P09630 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
HOXC6P09630 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC6P09630 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC6P09630 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC6P09630 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms