Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 BX276092.2-201ENST00000417668 665 ntBASIC13.48□□□□□ -0.25
HLA-DQA1P01909 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 LINC02199-201ENST00000506655 2702 ntBASIC13.48□□□□□ -0.25
HLA-DQA1P01909 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
HLA-DQA1P01909 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 PCDHB17P-201ENST00000539533 2393 ntBASIC13.47□□□□□ -0.25
HLA-DQA1P01909 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 AC026691.1-201ENST00000602502 2017 ntBASIC13.47□□□□□ -0.25
HLA-DQA1P01909 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.47□□□□□ -0.25
HLA-DQA1P01909 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 AC090192.1-201ENST00000517740 490 ntBASIC13.47□□□□□ -0.25
HLA-DQA1P01909 KRT18P41-201ENST00000518924 1277 ntBASIC13.47□□□□□ -0.25
HLA-DQA1P01909 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 RAP2CP1-201ENST00000605103 478 ntBASIC13.47□□□□□ -0.25
HLA-DQA1P01909 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.47□□□□□ -0.25
HLA-DQA1P01909 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 KRT17P1-201ENST00000399211 1546 ntBASIC13.47□□□□□ -0.25
HLA-DQA1P01909 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HLA-DQA1P01909 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 GPX1P1-201ENST00000388829 606 ntBASIC13.46□□□□□ -0.25
HLA-DQA1P01909 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HLA-DQA1P01909 AL512625.2-201ENST00000417533 625 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms