Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN1O95832 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDN1O95832 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN1O95832 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
CLDN1O95832 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDN1O95832 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDN1O95832 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.97■□□□□ 0.15
CLDN1O95832 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN1O95832 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDN1O95832 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN1O95832 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CLDN1O95832 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.97■□□□□ 0.15
CLDN1O95832 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDN1O95832 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLDN1O95832 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLDN1O95832 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.97■□□□□ 0.15
CLDN1O95832 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN1O95832 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN1O95832 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN1O95832 INTS4P1-201ENST00000438455 1935 ntBASIC15.96■□□□□ 0.15
CLDN1O95832 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN1O95832 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN1O95832 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CLDN1O95832 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDN1O95832 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN1O95832 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CLDN1O95832 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN1O95832 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN1O95832 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN1O95832 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDN1O95832 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
CLDN1O95832 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDN1O95832 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDN1O95832 SNHG9-202ENST00000564014 471 ntBASIC15.96■□□□□ 0.15
CLDN1O95832 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN1O95832 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CLDN1O95832 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN1O95832 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN1O95832 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN1O95832 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDN1O95832 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDN1O95832 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLDN1O95832 AP002414.3-201ENST00000589352 1468 ntBASIC15.96■□□□□ 0.14
CLDN1O95832 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLDN1O95832 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.96■□□□□ 0.14
CLDN1O95832 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.96■□□□□ 0.14
CLDN1O95832 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
CLDN1O95832 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN1O95832 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.95■□□□□ 0.14
CLDN1O95832 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN1O95832 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN1O95832 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN1O95832 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN1O95832 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.95■□□□□ 0.14
CLDN1O95832 AL645939.2-201ENST00000427340 991 ntBASIC15.95■□□□□ 0.14
CLDN1O95832 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN1O95832 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN1O95832 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN1O95832 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN1O95832 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.95■□□□□ 0.14
CLDN1O95832 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN1O95832 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
CLDN1O95832 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLDN1O95832 AC105339.3-201ENST00000560043 636 ntBASIC15.95■□□□□ 0.14
CLDN1O95832 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.95■□□□□ 0.14
CLDN1O95832 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLDN1O95832 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.95■□□□□ 0.14
CLDN1O95832 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN1O95832 AL356309.3-201ENST00000624132 1934 ntBASIC15.95■□□□□ 0.14
CLDN1O95832 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.95■□□□□ 0.14
CLDN1O95832 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDN1O95832 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
CLDN1O95832 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDN1O95832 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN1O95832 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.94■□□□□ 0.14
CLDN1O95832 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.94■□□□□ 0.14
CLDN1O95832 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.94■□□□□ 0.14
CLDN1O95832 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.94■□□□□ 0.14
CLDN1O95832 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN1O95832 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CLDN1O95832 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN1O95832 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN1O95832 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN1O95832 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN1O95832 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.94■□□□□ 0.14
CLDN1O95832 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN1O95832 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN1O95832 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN1O95832 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLDN1O95832 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms