Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE6O95741 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE6O95741 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE6O95741 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CPNE6O95741 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.56■□□□□ 0.4
CPNE6O95741 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CPNE6O95741 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE6O95741 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.56■□□□□ 0.4
CPNE6O95741 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE6O95741 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE6O95741 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CPNE6O95741 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 AC112777.1-201ENST00000540175 1423 ntBASIC17.55■□□□□ 0.4
CPNE6O95741 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.55■□□□□ 0.4
CPNE6O95741 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.55■□□□□ 0.4
CPNE6O95741 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CPNE6O95741 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CPNE6O95741 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE6O95741 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.55■□□□□ 0.4
CPNE6O95741 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE6O95741 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 NUS1P2-201ENST00000417358 873 ntBASIC17.55■□□□□ 0.4
CPNE6O95741 POM121L3P-201ENST00000419331 1163 ntBASIC17.55■□□□□ 0.4
CPNE6O95741 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE6O95741 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CPNE6O95741 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CPNE6O95741 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE6O95741 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.55■□□□□ 0.4
CPNE6O95741 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.55■□□□□ 0.4
CPNE6O95741 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE6O95741 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CPNE6O95741 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.55■□□□□ 0.4
CPNE6O95741 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CPNE6O95741 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE6O95741 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE6O95741 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CPNE6O95741 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CPNE6O95741 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE6O95741 MYLKP1-201ENST00000509077 1580 ntBASIC17.54■□□□□ 0.4
CPNE6O95741 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE6O95741 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CPNE6O95741 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 SIRPAP1-201ENST00000448467 1770 ntBASIC17.54■□□□□ 0.4
CPNE6O95741 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE6O95741 AC091607.1-201ENST00000490318 1060 ntBASIC17.54■□□□□ 0.4
CPNE6O95741 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE6O95741 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CPNE6O95741 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE6O95741 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CPNE6O95741 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CPNE6O95741 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.54■□□□□ 0.4
CPNE6O95741 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 HCG11-201ENST00000411553 5696 ntBASIC17.54■□□□□ 0.4
CPNE6O95741 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE6O95741 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPNE6O95741 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE6O95741 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE6O95741 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms