Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.17■□□□□ 0.66
CSPG5O95196 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CSPG5O95196 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.17■□□□□ 0.66
CSPG5O95196 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CSPG5O95196 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CSPG5O95196 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.17■□□□□ 0.66
CSPG5O95196 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.17■□□□□ 0.66
CSPG5O95196 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.17■□□□□ 0.66
CSPG5O95196 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CSPG5O95196 RNA5SP416-201ENST00000516838 111 ntBASIC19.17■□□□□ 0.66
CSPG5O95196 KRT18P41-201ENST00000518924 1277 ntBASIC19.17■□□□□ 0.66
CSPG5O95196 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.17■□□□□ 0.66
CSPG5O95196 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 AC008735.5-201ENST00000623544 497 ntBASIC19.17■□□□□ 0.66
CSPG5O95196 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CSPG5O95196 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSPG5O95196 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG5O95196 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CSPG5O95196 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG5O95196 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG5O95196 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG5O95196 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG5O95196 AL591424.1-201ENST00000442569 1213 ntBASIC19.16■□□□□ 0.66
CSPG5O95196 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CSPG5O95196 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG5O95196 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG5O95196 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
CSPG5O95196 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.16■□□□□ 0.66
CSPG5O95196 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.16■□□□□ 0.66
CSPG5O95196 AC008687.5-201ENST00000593746 558 ntBASIC19.16■□□□□ 0.66
CSPG5O95196 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG5O95196 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG5O95196 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG5O95196 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CSPG5O95196 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.16■□□□□ 0.66
CSPG5O95196 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.16■□□□□ 0.66
CSPG5O95196 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CSPG5O95196 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CSPG5O95196 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.16■□□□□ 0.66
CSPG5O95196 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSPG5O95196 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CSPG5O95196 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CSPG5O95196 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.15■□□□□ 0.66
CSPG5O95196 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CSPG5O95196 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.15■□□□□ 0.66
CSPG5O95196 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CSPG5O95196 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.15■□□□□ 0.66
CSPG5O95196 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CSPG5O95196 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CSPG5O95196 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.15■□□□□ 0.66
CSPG5O95196 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.15■□□□□ 0.66
CSPG5O95196 AC105339.3-201ENST00000560043 636 ntBASIC19.15■□□□□ 0.66
CSPG5O95196 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.15■□□□□ 0.66
CSPG5O95196 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CSPG5O95196 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.15■□□□□ 0.66
CSPG5O95196 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSPG5O95196 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms