Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNCRIPO60506 AC009533.2-201ENST00000543664 586 ntBASIC18.28■□□□□ 0.52
SYNCRIPO60506 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.28■□□□□ 0.52
SYNCRIPO60506 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.28■□□□□ 0.52
SYNCRIPO60506 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.28■□□□□ 0.52
SYNCRIPO60506 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNCRIPO60506 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNCRIPO60506 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNCRIPO60506 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNCRIPO60506 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNCRIPO60506 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNCRIPO60506 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNCRIPO60506 LTB4R2-202ENST00000528054 3092 ntBASIC18.28■□□□□ 0.52
SYNCRIPO60506 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNCRIPO60506 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNCRIPO60506 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNCRIPO60506 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNCRIPO60506 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 LINC01126-201ENST00000623515 1646 ntBASIC18.27■□□□□ 0.52
SYNCRIPO60506 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 TP73-AS1-210ENST00000637775 1455 ntBASIC18.27■□□□□ 0.52
SYNCRIPO60506 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SYNCRIPO60506 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SYNCRIPO60506 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.27■□□□□ 0.52
SYNCRIPO60506 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SYNCRIPO60506 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 MRPL3P1-201ENST00000400109 1033 ntBASIC18.27■□□□□ 0.52
SYNCRIPO60506 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
SYNCRIPO60506 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.27■□□□□ 0.52
SYNCRIPO60506 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.27■□□□□ 0.52
SYNCRIPO60506 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.27■□□□□ 0.52
SYNCRIPO60506 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.27■□□□□ 0.52
SYNCRIPO60506 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.27■□□□□ 0.52
SYNCRIPO60506 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNCRIPO60506 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SYNCRIPO60506 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SYNCRIPO60506 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYNCRIPO60506 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYNCRIPO60506 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SYNCRIPO60506 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYNCRIPO60506 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SYNCRIPO60506 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 RCN1P2-201ENST00000398357 915 ntBASIC18.26■□□□□ 0.51
SYNCRIPO60506 AL022342.1-201ENST00000400363 863 ntBASIC18.26■□□□□ 0.51
SYNCRIPO60506 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 AC132008.2-207ENST00000454517 770 ntBASIC18.26■□□□□ 0.51
SYNCRIPO60506 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNCRIPO60506 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNCRIPO60506 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.25■□□□□ 0.51
SYNCRIPO60506 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNCRIPO60506 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNCRIPO60506 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNCRIPO60506 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNCRIPO60506 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNCRIPO60506 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNCRIPO60506 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms