Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.57■□□□□ 0.56
MSI1O43347 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MSI1O43347 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.57■□□□□ 0.56
MSI1O43347 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.57■□□□□ 0.56
MSI1O43347 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MSI1O43347 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.56■□□□□ 0.56
MSI1O43347 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
MSI1O43347 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.56■□□□□ 0.56
MSI1O43347 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 RCN1P2-201ENST00000398357 915 ntBASIC18.56■□□□□ 0.56
MSI1O43347 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.56■□□□□ 0.56
MSI1O43347 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.56■□□□□ 0.56
MSI1O43347 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.56■□□□□ 0.56
MSI1O43347 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
MSI1O43347 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.56■□□□□ 0.56
MSI1O43347 AC091304.2-201ENST00000564639 760 ntBASIC18.56■□□□□ 0.56
MSI1O43347 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.56■□□□□ 0.56
MSI1O43347 AC114341.1-201ENST00000618070 349 ntBASIC18.56■□□□□ 0.56
MSI1O43347 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.56■□□□□ 0.56
MSI1O43347 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.56■□□□□ 0.56
MSI1O43347 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.56■□□□□ 0.56
MSI1O43347 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MSI1O43347 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.56■□□□□ 0.56
MSI1O43347 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.55■□□□□ 0.56
MSI1O43347 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.55■□□□□ 0.56
MSI1O43347 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
MSI1O43347 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.55■□□□□ 0.56
MSI1O43347 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.55■□□□□ 0.56
MSI1O43347 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MSI1O43347 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.55■□□□□ 0.56
MSI1O43347 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.55■□□□□ 0.56
MSI1O43347 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.55■□□□□ 0.56
MSI1O43347 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.55■□□□□ 0.56
MSI1O43347 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.55■□□□□ 0.56
MSI1O43347 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.55■□□□□ 0.56
MSI1O43347 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.55■□□□□ 0.56
MSI1O43347 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.55■□□□□ 0.56
MSI1O43347 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.55■□□□□ 0.56
MSI1O43347 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.55■□□□□ 0.56
MSI1O43347 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MSI1O43347 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MSI1O43347 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.55■□□□□ 0.56
MSI1O43347 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.54■□□□□ 0.56
MSI1O43347 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.54■□□□□ 0.56
MSI1O43347 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.54■□□□□ 0.56
MSI1O43347 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MSI1O43347 AC009949.1-201ENST00000623048 1830 ntBASIC18.54■□□□□ 0.56
MSI1O43347 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.54■□□□□ 0.56
MSI1O43347 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.54■□□□□ 0.56
MSI1O43347 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MSI1O43347 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.54■□□□□ 0.56
MSI1O43347 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.54■□□□□ 0.56
MSI1O43347 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.54■□□□□ 0.56
MSI1O43347 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MSI1O43347 AC010460.3-201ENST00000511359 1579 ntBASIC18.54■□□□□ 0.56
MSI1O43347 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms