Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LYRM1O43325 AC099343.3-201ENST00000605834 2503 ntBASIC15.39■□□□□ 0.05
LYRM1O43325 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.39■□□□□ 0.05
LYRM1O43325 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.39■□□□□ 0.05
LYRM1O43325 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYRM1O43325 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.38■□□□□ 0.05
LYRM1O43325 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.38■□□□□ 0.05
LYRM1O43325 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.38■□□□□ 0.05
LYRM1O43325 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYRM1O43325 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYRM1O43325 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYRM1O43325 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LYRM1O43325 AC005915.1-201ENST00000624912 2018 ntBASIC15.38■□□□□ 0.05
LYRM1O43325 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.38■□□□□ 0.05
LYRM1O43325 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYRM1O43325 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.38■□□□□ 0.05
LYRM1O43325 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.38■□□□□ 0.05
LYRM1O43325 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LYRM1O43325 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYRM1O43325 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
LYRM1O43325 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYRM1O43325 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYRM1O43325 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.38■□□□□ 0.05
LYRM1O43325 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LYRM1O43325 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.38■□□□□ 0.05
LYRM1O43325 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LYRM1O43325 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.38■□□□□ 0.05
LYRM1O43325 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.38■□□□□ 0.05
LYRM1O43325 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 AC008406.3-201ENST00000620001 1374 ntBASIC15.37■□□□□ 0.05
LYRM1O43325 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LYRM1O43325 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.37■□□□□ 0.05
LYRM1O43325 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.37■□□□□ 0.05
LYRM1O43325 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.37■□□□□ 0.05
LYRM1O43325 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.37■□□□□ 0.05
LYRM1O43325 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.37■□□□□ 0.05
LYRM1O43325 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.37■□□□□ 0.05
LYRM1O43325 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.37■□□□□ 0.05
LYRM1O43325 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.37■□□□□ 0.05
LYRM1O43325 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
LYRM1O43325 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
LYRM1O43325 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.37■□□□□ 0.05
LYRM1O43325 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.37■□□□□ 0.05
LYRM1O43325 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LYRM1O43325 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.37■□□□□ 0.05
LYRM1O43325 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LYRM1O43325 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LYRM1O43325 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.37■□□□□ 0.05
LYRM1O43325 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
LYRM1O43325 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.36■□□□□ 0.05
LYRM1O43325 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.36■□□□□ 0.05
LYRM1O43325 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.36■□□□□ 0.05
LYRM1O43325 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.36■□□□□ 0.05
LYRM1O43325 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.36■□□□□ 0.05
LYRM1O43325 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.36■□□□□ 0.05
LYRM1O43325 CYP2T1P-202ENST00000641596 2535 ntBASIC15.36■□□□□ 0.05
LYRM1O43325 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.36■□□□□ 0.05
LYRM1O43325 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 PRSS44-201ENST00000515154 1146 ntBASIC15.36■□□□□ 0.05
LYRM1O43325 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.36■□□□□ 0.05
LYRM1O43325 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LYRM1O43325 AL121829.2-201ENST00000620908 328 ntBASIC15.36■□□□□ 0.05
LYRM1O43325 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.36■□□□□ 0.05
LYRM1O43325 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LYRM1O43325 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms