Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GCSHP2-201ENST00000560971 527 ntBASIC14.37□□□□□ -0.11
UPK2O00526 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.37□□□□□ -0.11
UPK2O00526 AC024563.2-201ENST00000603282 481 ntBASIC14.37□□□□□ -0.11
UPK2O00526 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.37□□□□□ -0.11
UPK2O00526 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.37□□□□□ -0.11
UPK2O00526 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UPK2O00526 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.37□□□□□ -0.11
UPK2O00526 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
UPK2O00526 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK2O00526 AC108860.2-201ENST00000562760 2183 ntBASIC14.37□□□□□ -0.11
UPK2O00526 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK2O00526 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.37□□□□□ -0.11
UPK2O00526 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
UPK2O00526 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
UPK2O00526 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
UPK2O00526 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK2O00526 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
UPK2O00526 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK2O00526 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK2O00526 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK2O00526 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK2O00526 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK2O00526 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK2O00526 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK2O00526 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK2O00526 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.36□□□□□ -0.11
UPK2O00526 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK2O00526 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.36□□□□□ -0.11
UPK2O00526 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK2O00526 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.36□□□□□ -0.11
UPK2O00526 AL138966.2-201ENST00000621997 464 ntBASIC14.36□□□□□ -0.11
UPK2O00526 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UPK2O00526 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
UPK2O00526 KRT89P-201ENST00000620027 1478 ntBASIC14.36□□□□□ -0.11
UPK2O00526 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK2O00526 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 PRORSD1P-202ENST00000563365 2154 ntBASIC14.36□□□□□ -0.11
UPK2O00526 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.36□□□□□ -0.11
UPK2O00526 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UPK2O00526 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK2O00526 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 KRT18P65-201ENST00000439811 1286 ntBASIC14.35□□□□□ -0.11
UPK2O00526 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UPK2O00526 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
UPK2O00526 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 LINC00304-203ENST00000565008 1864 ntBASIC14.35□□□□□ -0.11
UPK2O00526 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
UPK2O00526 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.35□□□□□ -0.11
UPK2O00526 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
UPK2O00526 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UPK2O00526 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UPK2O00526 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
UPK2O00526 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
UPK2O00526 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UPK2O00526 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 HLA-J-201ENST00000462773 1622 ntBASIC14.34□□□□□ -0.11
UPK2O00526 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UPK2O00526 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
UPK2O00526 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms