Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC11.64□□□□□ -0.55
LST1O00453 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LST1O00453 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.63□□□□□ -0.55
LST1O00453 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.63□□□□□ -0.55
LST1O00453 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.63□□□□□ -0.55
LST1O00453 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LST1O00453 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC11.63□□□□□ -0.55
LST1O00453 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
LST1O00453 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.63□□□□□ -0.55
LST1O00453 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
LST1O00453 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.63□□□□□ -0.55
LST1O00453 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC11.63□□□□□ -0.55
LST1O00453 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC11.63□□□□□ -0.55
LST1O00453 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 HES2-205ENST00000487437 968 ntTSL 3 BASIC11.63□□□□□ -0.55
LST1O00453 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC11.63□□□□□ -0.55
LST1O00453 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
LST1O00453 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LST1O00453 AC005915.1-201ENST00000624912 2018 ntBASIC11.63□□□□□ -0.55
LST1O00453 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.63□□□□□ -0.55
LST1O00453 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.63□□□□□ -0.55
LST1O00453 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC11.63□□□□□ -0.55
LST1O00453 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LST1O00453 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LST1O00453 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
LST1O00453 AC092384.3-202ENST00000564646 2873 ntBASIC11.62□□□□□ -0.55
LST1O00453 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
LST1O00453 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.62□□□□□ -0.55
LST1O00453 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC11.62□□□□□ -0.55
LST1O00453 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.62□□□□□ -0.55
LST1O00453 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.62□□□□□ -0.55
LST1O00453 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC11.62□□□□□ -0.55
LST1O00453 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC11.62□□□□□ -0.55
LST1O00453 KRT18P68-201ENST00000392293 1000 ntBASIC11.62□□□□□ -0.55
LST1O00453 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC11.62□□□□□ -0.55
LST1O00453 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LST1O00453 AL162412.1-201ENST00000567129 965 ntBASIC11.62□□□□□ -0.55
LST1O00453 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC11.62□□□□□ -0.55
LST1O00453 AL136967.2-201ENST00000623968 743 ntBASIC11.62□□□□□ -0.55
LST1O00453 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.62□□□□□ -0.55
LST1O00453 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC11.62□□□□□ -0.55
LST1O00453 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
LST1O00453 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LST1O00453 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms