Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.07■□□□□ 0.64
O00370 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
O00370 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
O00370 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
O00370 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.07■□□□□ 0.64
O00370 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
O00370 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
O00370 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
O00370 AL592071.1-201ENST00000611956 408 ntBASIC19.07■□□□□ 0.64
O00370 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.07■□□□□ 0.64
O00370 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
O00370 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
O00370 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
O00370 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
O00370 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
O00370 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
O00370 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.07■□□□□ 0.64
O00370 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.07■□□□□ 0.64
O00370 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
O00370 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
O00370 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
O00370 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
O00370 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 AC100803.2-201ENST00000562459 1963 ntBASIC19.06■□□□□ 0.64
O00370 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.06■□□□□ 0.64
O00370 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.06■□□□□ 0.64
O00370 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 CHCHD2P8-201ENST00000429873 447 ntBASIC19.06■□□□□ 0.64
O00370 TSSC2-201ENST00000450217 709 ntBASIC19.06■□□□□ 0.64
O00370 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.06■□□□□ 0.64
O00370 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.06■□□□□ 0.64
O00370 AC090616.6-201ENST00000582640 721 ntBASIC19.06■□□□□ 0.64
O00370 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
O00370 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.06■□□□□ 0.64
O00370 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.06■□□□□ 0.64
O00370 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
O00370 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
O00370 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
O00370 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
O00370 AC012317.2-201ENST00000623305 2251 ntBASIC19.05■□□□□ 0.64
O00370 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
O00370 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
O00370 KRT18P55-202ENST00000578578 1546 ntBASIC19.05■□□□□ 0.64
O00370 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 AC022898.2-201ENST00000616822 1312 ntBASIC19.05■□□□□ 0.64
O00370 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.05■□□□□ 0.64
O00370 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
O00370 AP002383.4-201ENST00000442518 975 ntBASIC19.05■□□□□ 0.64
O00370 MTCL1P1-201ENST00000446207 792 ntBASIC19.05■□□□□ 0.64
O00370 GUSBP12-201ENST00000513727 720 ntBASIC19.05■□□□□ 0.64
O00370 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.05■□□□□ 0.64
O00370 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.05■□□□□ 0.64
O00370 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
O00370 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.05■□□□□ 0.64
O00370 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.05■□□□□ 0.64
O00370 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.05■□□□□ 0.64
O00370 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
O00370 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.05■□□□□ 0.64
O00370 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.04■□□□□ 0.64
O00370 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
O00370 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
O00370 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
O00370 AL845331.1-201ENST00000424978 1190 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms