Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
AP3B1O00203 TSPY12P-201ENST00000421279 868 ntBASIC18.09■□□□□ 0.49
AP3B1O00203 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.09■□□□□ 0.49
AP3B1O00203 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
AP3B1O00203 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.09■□□□□ 0.49
AP3B1O00203 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.09■□□□□ 0.49
AP3B1O00203 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.09■□□□□ 0.49
AP3B1O00203 SIRPAP1-201ENST00000448467 1770 ntBASIC18.09■□□□□ 0.49
AP3B1O00203 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3B1O00203 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.09■□□□□ 0.49
AP3B1O00203 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.09■□□□□ 0.49
AP3B1O00203 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP3B1O00203 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.08■□□□□ 0.49
AP3B1O00203 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
AP3B1O00203 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP3B1O00203 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
AP3B1O00203 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.08■□□□□ 0.49
AP3B1O00203 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
AP3B1O00203 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP3B1O00203 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
AP3B1O00203 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
AP3B1O00203 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
AP3B1O00203 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP3B1O00203 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
AP3B1O00203 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.08■□□□□ 0.48
AP3B1O00203 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
AP3B1O00203 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.08■□□□□ 0.48
AP3B1O00203 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.08■□□□□ 0.48
AP3B1O00203 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.08■□□□□ 0.48
AP3B1O00203 AC139887.4-201ENST00000607877 719 ntBASIC18.08■□□□□ 0.48
AP3B1O00203 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
AP3B1O00203 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
AP3B1O00203 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
AP3B1O00203 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3B1O00203 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3B1O00203 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
AP3B1O00203 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3B1O00203 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3B1O00203 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3B1O00203 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 RNF152P1-201ENST00000397754 604 ntBASIC18.07■□□□□ 0.48
AP3B1O00203 SPDYE15P-201ENST00000424157 909 ntBASIC18.07■□□□□ 0.48
AP3B1O00203 TSPY5P-201ENST00000426936 936 ntBASIC18.07■□□□□ 0.48
AP3B1O00203 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.07■□□□□ 0.48
AP3B1O00203 AP003733.1-201ENST00000491725 852 ntBASIC18.07■□□□□ 0.48
AP3B1O00203 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
AP3B1O00203 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3B1O00203 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3B1O00203 ZNF444P1-201ENST00000559497 298 ntBASIC18.07■□□□□ 0.48
AP3B1O00203 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3B1O00203 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3B1O00203 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3B1O00203 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3B1O00203 HLA-J-201ENST00000462773 1622 ntBASIC18.07■□□□□ 0.48
AP3B1O00203 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3B1O00203 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
AP3B1O00203 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
AP3B1O00203 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
AP3B1O00203 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AP3B1O00203 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms