Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV27A0A087WT01 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 AC022898.2-201ENST00000616822 1312 ntBASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 AC080080.1-201ENST00000625121 2420 ntBASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV27A0A087WT01 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 AL023973.1-201ENST00000624619 620 ntBASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV27A0A087WT01 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms