Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC6Q9Y625 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC6Q9Y625 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC6Q9Y625 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC6Q9Y625 ECEL1P2-202ENST00000465689 757 ntBASIC16.98■□□□□ 0.31
GPC6Q9Y625 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC6Q9Y625 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC6Q9Y625 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
GPC6Q9Y625 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.98■□□□□ 0.31
GPC6Q9Y625 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GPC6Q9Y625 AC097493.4-201ENST00000641197 219 ntBASIC16.98■□□□□ 0.31
GPC6Q9Y625 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC6Q9Y625 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GPC6Q9Y625 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC6Q9Y625 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC6Q9Y625 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.98■□□□□ 0.31
GPC6Q9Y625 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GPC6Q9Y625 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC6Q9Y625 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC6Q9Y625 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.98■□□□□ 0.31
GPC6Q9Y625 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GPC6Q9Y625 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 AC012306.2-201ENST00000609350 630 ntBASIC16.97■□□□□ 0.31
GPC6Q9Y625 FAM87A-204ENST00000613235 858 ntBASIC16.97■□□□□ 0.31
GPC6Q9Y625 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GPC6Q9Y625 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
GPC6Q9Y625 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.96■□□□□ 0.31
GPC6Q9Y625 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GPC6Q9Y625 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
GPC6Q9Y625 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GPC6Q9Y625 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GPC6Q9Y625 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.96■□□□□ 0.3
GPC6Q9Y625 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GPC6Q9Y625 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GPC6Q9Y625 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms