Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 ADM-208ENST00000534464 1640 ntTSL 2 BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 AC098818.2-201ENST00000564925 2320 ntBASIC23.28■■□□□ 1.32
SPG7Q9UQ90 AL353593.2-201ENST00000602529 1483 ntBASIC23.28■■□□□ 1.32
SPG7Q9UQ90 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SPG7Q9UQ90 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 AC064836.3-201ENST00000607928 673 ntBASIC23.27■■□□□ 1.32
SPG7Q9UQ90 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SPG7Q9UQ90 SIRPAP1-201ENST00000448467 1770 ntBASIC23.27■■□□□ 1.32
SPG7Q9UQ90 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC23.27■■□□□ 1.31
SPG7Q9UQ90 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 AP000974.1-201ENST00000623909 2387 ntBASIC23.26■■□□□ 1.31
SPG7Q9UQ90 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 AC023274.1-201ENST00000418278 595 ntBASIC23.26■■□□□ 1.31
SPG7Q9UQ90 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 AP001160.2-201ENST00000596071 487 ntBASIC23.26■■□□□ 1.31
SPG7Q9UQ90 COPE-211ENST00000600932 1144 ntTSL 5 BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 AC004706.3-202ENST00000621574 984 ntBASIC23.26■■□□□ 1.31
SPG7Q9UQ90 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SPG7Q9UQ90 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 AL049757.1-201ENST00000616842 1596 ntBASIC23.25■■□□□ 1.31
SPG7Q9UQ90 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SPG7Q9UQ90 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 CROCCP3-202ENST00000420820 1947 ntBASIC23.24■■□□□ 1.31
SPG7Q9UQ90 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms