Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 AC018712.1-201ENST00000455767 687 ntBASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 RNPS1P1-201ENST00000507437 918 ntBASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 AC073648.2-201ENST00000510116 352 ntBASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DENND2AQ9ULE3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 AC122714.2-201ENST00000502787 707 ntBASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DENND2AQ9ULE3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 BX640515.1-201ENST00000617215 977 ntBASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 AP000867.4-201ENST00000641616 219 ntBASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DENND2AQ9ULE3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 AL022342.1-201ENST00000400363 863 ntBASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.61■■□□□ 1.05
DENND2AQ9ULE3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms