Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 SIGLEC30P-201ENST00000455569 941 ntBASIC22.66■■□□□ 1.22
CCNL1Q9UK58 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CCNL1Q9UK58 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 PAWRP1-201ENST00000451083 565 ntBASIC22.65■■□□□ 1.22
CCNL1Q9UK58 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 OR7E47P-204ENST00000575924 449 ntBASIC22.65■■□□□ 1.22
CCNL1Q9UK58 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNL1Q9UK58 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
CCNL1Q9UK58 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCNL1Q9UK58 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCNL1Q9UK58 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCNL1Q9UK58 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 DDT-204ENST00000404092 805 ntTSL 3 BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 AC004461.1-201ENST00000412461 403 ntBASIC22.64■■□□□ 1.21
CCNL1Q9UK58 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNL1Q9UK58 ESPNP-201ENST00000270691 2015 ntBASIC22.64■■□□□ 1.21
CCNL1Q9UK58 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 NEK7-201ENST00000367383 586 ntTSL 2 BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 HLA-J-203ENST00000494367 1087 ntBASIC22.63■■□□□ 1.21
CCNL1Q9UK58 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 AC005498.2-205ENST00000593218 784 ntBASIC22.63■■□□□ 1.21
CCNL1Q9UK58 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 AC092902.6-201ENST00000641783 218 ntBASIC22.63■■□□□ 1.21
CCNL1Q9UK58 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNL1Q9UK58 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 FUT8-AS1-201ENST00000621019 1521 ntBASIC22.62■■□□□ 1.21
CCNL1Q9UK58 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 AC003669.1-201ENST00000334569 611 ntBASIC22.62■■□□□ 1.21
CCNL1Q9UK58 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 PTCHD3P3-201ENST00000403073 906 ntBASIC22.62■■□□□ 1.21
CCNL1Q9UK58 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 AC138761.1-201ENST00000584393 385 ntBASIC22.62■■□□□ 1.21
CCNL1Q9UK58 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 AC105339.1-204ENST00000636249 355 ntBASIC22.62■■□□□ 1.21
CCNL1Q9UK58 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 AFG3L1P-217ENST00000557444 2447 ntBASIC22.62■■□□□ 1.21
CCNL1Q9UK58 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCNL1Q9UK58 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.61■■□□□ 1.21
CCNL1Q9UK58 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CCNL1Q9UK58 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCNL1Q9UK58 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
CCNL1Q9UK58 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.61■■□□□ 1.21
CCNL1Q9UK58 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CCNL1Q9UK58 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCNL1Q9UK58 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms