Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 AL137013.1-201ENST00000432946 1228 ntBASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 ATP5G1P1-201ENST00000448724 379 ntBASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.91□□□□□ -0.02
LIN7CQ9NUP9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 WWOX-216ENST00000569818 525 ntBASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 MIR4674-201ENST00000582457 87 ntBASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIN7CQ9NUP9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 AP000523.1-201ENST00000398242 1049 ntBASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms