Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 TPSP2-201ENST00000561760 610 ntBASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.93■□□□□ 0.3
PRDM9Q9NQV7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 AC068472.1-201ENST00000474589 881 ntBASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 VENTXP7-201ENST00000475503 772 ntBASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 AC011840.4-201ENST00000578471 627 ntBASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 AC007613.1-201ENST00000572811 2597 ntBASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PRDM9Q9NQV7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 DDX43P3-201ENST00000441064 443 ntBASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 LINC00265-3P-201ENST00000447588 903 ntBASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRDM9Q9NQV7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
PRDM9Q9NQV7 AC005332.8-201ENST00000622750 2735 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms