Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 Z83836.1-201ENST00000624605 1642 ntBASIC16.61■□□□□ 0.25
UBQLN3Q9H347 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 IGHGP-201ENST00000390555 1178 ntBASIC16.61■□□□□ 0.25
UBQLN3Q9H347 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 TSPY22P-201ENST00000427496 604 ntBASIC16.61■□□□□ 0.25
UBQLN3Q9H347 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 AC005332.3-201ENST00000589904 676 ntBASIC16.61■□□□□ 0.25
UBQLN3Q9H347 AL390719.2-201ENST00000606993 987 ntBASIC16.61■□□□□ 0.25
UBQLN3Q9H347 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBQLN3Q9H347 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 TSSC2-201ENST00000450217 709 ntBASIC16.6■□□□□ 0.25
UBQLN3Q9H347 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBQLN3Q9H347 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 GPR32P1-201ENST00000601788 811 ntBASIC16.59■□□□□ 0.25
UBQLN3Q9H347 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.59■□□□□ 0.25
UBQLN3Q9H347 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 AC099343.3-201ENST00000605834 2503 ntBASIC16.59■□□□□ 0.25
UBQLN3Q9H347 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.59■□□□□ 0.25
UBQLN3Q9H347 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBQLN3Q9H347 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.58■□□□□ 0.24
UBQLN3Q9H347 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms