Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VCX3BQ9H321 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VCX3BQ9H321 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VCX3BQ9H321 AC007326.2-201ENST00000624224 7579 ntBASIC17.08■□□□□ 0.33
VCX3BQ9H321 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.08■□□□□ 0.33
VCX3BQ9H321 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.08■□□□□ 0.33
VCX3BQ9H321 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VCX3BQ9H321 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.08■□□□□ 0.33
VCX3BQ9H321 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
VCX3BQ9H321 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.08■□□□□ 0.32
VCX3BQ9H321 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
VCX3BQ9H321 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VCX3BQ9H321 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCX3BQ9H321 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.08■□□□□ 0.32
VCX3BQ9H321 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.08■□□□□ 0.32
VCX3BQ9H321 BID-214ENST00000617586 542 ntTSL 5 BASIC17.08■□□□□ 0.32
VCX3BQ9H321 AC092437.1-201ENST00000624794 1048 ntBASIC17.08■□□□□ 0.32
VCX3BQ9H321 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
VCX3BQ9H321 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCX3BQ9H321 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
VCX3BQ9H321 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VCX3BQ9H321 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VCX3BQ9H321 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.08■□□□□ 0.32
VCX3BQ9H321 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 AC005181.1-201ENST00000604782 1256 ntBASIC17.07■□□□□ 0.32
VCX3BQ9H321 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.07■□□□□ 0.32
VCX3BQ9H321 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VCX3BQ9H321 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 KRT17P1-201ENST00000399211 1546 ntBASIC17.06■□□□□ 0.32
VCX3BQ9H321 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VCX3BQ9H321 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
VCX3BQ9H321 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VCX3BQ9H321 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.06■□□□□ 0.32
VCX3BQ9H321 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.06■□□□□ 0.32
VCX3BQ9H321 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.06■□□□□ 0.32
VCX3BQ9H321 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VCX3BQ9H321 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.06■□□□□ 0.32
VCX3BQ9H321 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.06■□□□□ 0.32
VCX3BQ9H321 NORAD-201ENST00000565493 5339 ntBASIC17.06■□□□□ 0.32
VCX3BQ9H321 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VCX3BQ9H321 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VCX3BQ9H321 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 LINC02199-201ENST00000506655 2702 ntBASIC17.05■□□□□ 0.32
VCX3BQ9H321 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms