Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A3Q99624 AF186996.4-201ENST00000467186 377 ntBASIC17.33■□□□□ 0.36
SLC38A3Q99624 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC38A3Q99624 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC38A3Q99624 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.33■□□□□ 0.36
SLC38A3Q99624 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLC38A3Q99624 MTDHP3-201ENST00000594186 672 ntBASIC17.33■□□□□ 0.36
SLC38A3Q99624 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A3Q99624 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC38A3Q99624 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLC38A3Q99624 WIZP1-201ENST00000531444 2299 ntBASIC17.33■□□□□ 0.36
SLC38A3Q99624 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A3Q99624 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A3Q99624 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A3Q99624 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SLC38A3Q99624 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A3Q99624 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC38A3Q99624 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC38A3Q99624 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC38A3Q99624 AC093010.1-201ENST00000473625 1624 ntBASIC17.32■□□□□ 0.36
SLC38A3Q99624 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.32■□□□□ 0.36
SLC38A3Q99624 RBM17P3-201ENST00000417687 1192 ntBASIC17.32■□□□□ 0.36
SLC38A3Q99624 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 TP73-AS1-207ENST00000624167 988 ntBASIC17.32■□□□□ 0.36
SLC38A3Q99624 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.32■□□□□ 0.36
SLC38A3Q99624 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC38A3Q99624 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 AL773604.1-201ENST00000617417 272 ntBASIC17.31■□□□□ 0.36
SLC38A3Q99624 AL355877.3-201ENST00000622820 899 ntBASIC17.31■□□□□ 0.36
SLC38A3Q99624 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC38A3Q99624 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC38A3Q99624 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A3Q99624 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC38A3Q99624 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
SLC38A3Q99624 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms