Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CASD1Q96PB1 AC093677.2-201ENST00000600169 1863 ntBASIC19.01■□□□□ 0.63
CASD1Q96PB1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CASD1Q96PB1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CASD1Q96PB1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19■□□□□ 0.63
CASD1Q96PB1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CASD1Q96PB1 AC019129.2-201ENST00000609837 1235 ntBASIC19■□□□□ 0.63
CASD1Q96PB1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CASD1Q96PB1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19■□□□□ 0.63
CASD1Q96PB1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19■□□□□ 0.63
CASD1Q96PB1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CASD1Q96PB1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 ELK2BP-201ENST00000415014 1224 ntBASIC18.99■□□□□ 0.63
CASD1Q96PB1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 AC002347.1-201ENST00000569543 541 ntBASIC18.99■□□□□ 0.63
CASD1Q96PB1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.99■□□□□ 0.63
CASD1Q96PB1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CASD1Q96PB1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.99■□□□□ 0.63
CASD1Q96PB1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 AP001160.2-201ENST00000596071 487 ntBASIC18.98■□□□□ 0.63
CASD1Q96PB1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.98■□□□□ 0.63
CASD1Q96PB1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASD1Q96PB1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.97■□□□□ 0.63
CASD1Q96PB1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 AC100803.2-201ENST00000562459 1963 ntBASIC18.97■□□□□ 0.63
CASD1Q96PB1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CASD1Q96PB1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms