Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPG11Q96JI7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPG11Q96JI7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPG11Q96JI7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPG11Q96JI7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SPG11Q96JI7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.13■□□□□ 0.01
SPG11Q96JI7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPG11Q96JI7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SPG11Q96JI7 CRYGEP-201ENST00000412192 528 ntBASIC15.13■□□□□ 0.01
SPG11Q96JI7 CEND1P1-201ENST00000451006 455 ntBASIC15.13■□□□□ 0.01
SPG11Q96JI7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.13■□□□□ 0.01
SPG11Q96JI7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SPG11Q96JI7 AL031432.2-201ENST00000566714 459 ntBASIC15.13■□□□□ 0.01
SPG11Q96JI7 AL928711.1-201ENST00000570165 459 ntBASIC15.13■□□□□ 0.01
SPG11Q96JI7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.13■□□□□ 0.01
SPG11Q96JI7 AC005498.2-205ENST00000593218 784 ntBASIC15.13■□□□□ 0.01
SPG11Q96JI7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPG11Q96JI7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SPG11Q96JI7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SPG11Q96JI7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SPG11Q96JI7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SPG11Q96JI7 GPR89P-201ENST00000407924 1495 ntBASIC15.13■□□□□ 0.01
SPG11Q96JI7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 AC004449.1-201ENST00000564240 433 ntBASIC15.12■□□□□ 0.01
SPG11Q96JI7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 PGM5P2-202ENST00000637225 1043 ntBASIC15.12■□□□□ 0.01
SPG11Q96JI7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 PDPK2P-202ENST00000562415 1191 ntBASIC15.12■□□□□ 0.01
SPG11Q96JI7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPG11Q96JI7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SPG11Q96JI7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 AC092902.6-201ENST00000641783 218 ntBASIC15.11■□□□□ 0.01
SPG11Q96JI7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPG11Q96JI7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SPG11Q96JI7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 AC132938.6-201ENST00000623828 1655 ntBASIC15.1■□□□□ 0.01
SPG11Q96JI7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPG11Q96JI7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.1■□□□□ 0.01
SPG11Q96JI7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms