Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.89■□□□□ 0.45
ECHDC3Q96DC8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.89■□□□□ 0.45
ECHDC3Q96DC8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.89■□□□□ 0.45
ECHDC3Q96DC8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.89■□□□□ 0.45
ECHDC3Q96DC8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.89■□□□□ 0.45
ECHDC3Q96DC8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 COX5BP2-201ENST00000392354 334 ntBASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 SLC25A6P5-201ENST00000435663 894 ntBASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 AC111152.3-201ENST00000569699 673 ntBASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 AC009949.1-201ENST00000623048 1830 ntBASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ECHDC3Q96DC8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 FAM220CP-201ENST00000395253 831 ntBASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 AC122714.2-201ENST00000502787 707 ntBASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ECHDC3Q96DC8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.86■□□□□ 0.45
ECHDC3Q96DC8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms