Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCAMP4Q969E2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SCAMP4Q969E2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SCAMP4Q969E2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCAMP4Q969E2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCAMP4Q969E2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.78■□□□□ 0.44
SCAMP4Q969E2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.78■□□□□ 0.44
SCAMP4Q969E2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCAMP4Q969E2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCAMP4Q969E2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 NUS1P2-201ENST00000417358 873 ntBASIC17.77■□□□□ 0.44
SCAMP4Q969E2 TSPY19P-201ENST00000418461 509 ntBASIC17.77■□□□□ 0.44
SCAMP4Q969E2 TSPY18P-201ENST00000441642 509 ntBASIC17.77■□□□□ 0.44
SCAMP4Q969E2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 AC096582.2-201ENST00000510860 516 ntBASIC17.77■□□□□ 0.44
SCAMP4Q969E2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCAMP4Q969E2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
SCAMP4Q969E2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 AL450487.1-201ENST00000426799 995 ntBASIC17.76■□□□□ 0.43
SCAMP4Q969E2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 UNC93B7-201ENST00000509439 705 ntBASIC17.76■□□□□ 0.43
SCAMP4Q969E2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 RNF165-205ENST00000588679 2904 ntBASIC17.76■□□□□ 0.43
SCAMP4Q969E2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.76■□□□□ 0.43
SCAMP4Q969E2 TP73-AS1-210ENST00000637775 1455 ntBASIC17.75■□□□□ 0.43
SCAMP4Q969E2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 KRT18P31-201ENST00000506277 1292 ntBASIC17.75■□□□□ 0.43
SCAMP4Q969E2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 AL121772.3-201ENST00000610840 674 ntBASIC17.75■□□□□ 0.43
SCAMP4Q969E2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCAMP4Q969E2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms