Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC148Q8NFR7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC148Q8NFR7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC148Q8NFR7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 KRT18P1-202ENST00000452408 1331 ntBASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 HTR7P1-202ENST00000624664 4411 ntBASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC148Q8NFR7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 UPK3BP1-201ENST00000428678 509 ntBASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 AC246785.2-201ENST00000432512 513 ntBASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 VENTXP7-201ENST00000475503 772 ntBASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 AC011840.4-201ENST00000578471 627 ntBASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 AP002414.4-201ENST00000589764 1148 ntBASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 AL353801.3-201ENST00000609898 542 ntBASIC20.61■□□□□ 0.89
CCDC148Q8NFR7 AC116407.2-201ENST00000613639 860 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms