Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 LINC00896-202ENST00000609602 2128 ntBASIC16.79■□□□□ 0.28
NUP43Q8NFH3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUP43Q8NFH3 LINC01311-201ENST00000565162 1445 ntBASIC16.79■□□□□ 0.28
NUP43Q8NFH3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 AC063952.2-201ENST00000498792 1227 ntBASIC16.78■□□□□ 0.28
NUP43Q8NFH3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 HYMAI.1-201ENST00000620949 238 ntBASIC16.78■□□□□ 0.28
NUP43Q8NFH3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUP43Q8NFH3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 IGHGP-201ENST00000390555 1178 ntBASIC16.77■□□□□ 0.28
NUP43Q8NFH3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 TSPY12P-201ENST00000421279 868 ntBASIC16.77■□□□□ 0.28
NUP43Q8NFH3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 VENTXP5-201ENST00000523979 775 ntBASIC16.77■□□□□ 0.28
NUP43Q8NFH3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NUP43Q8NFH3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.77■□□□□ 0.27
NUP43Q8NFH3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NUP43Q8NFH3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.77■□□□□ 0.27
NUP43Q8NFH3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NUP43Q8NFH3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
NUP43Q8NFH3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NUP43Q8NFH3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 TMPOP1-202ENST00000424642 1267 ntBASIC16.76■□□□□ 0.27
NUP43Q8NFH3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 DUX4L26-201ENST00000489078 1255 ntBASIC16.76■□□□□ 0.27
NUP43Q8NFH3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 AC022616.7-201ENST00000525383 220 ntBASIC16.76■□□□□ 0.27
NUP43Q8NFH3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms