Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 AC112482.1-201ENST00000492080 688 ntBASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SYNPOQ8N3V7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 PMS2P2-201ENST00000425039 1128 ntBASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 AC002347.1-201ENST00000569543 541 ntBASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 AL022326.1-202ENST00000641533 845 ntBASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNPOQ8N3V7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 AC079776.2-201ENST00000641154 1609 ntBASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 PRYP5-201ENST00000451909 266 ntBASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 AC004967.1-201ENST00000453589 447 ntBASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 MTDHP5-201ENST00000598980 586 ntBASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNPOQ8N3V7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 AC006557.2-201ENST00000592985 1240 ntBASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 MIR1199-201ENST00000621445 119 ntBASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 AC073592.4-201ENST00000623827 446 ntBASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 AP002414.3-201ENST00000589352 1468 ntBASIC18.13■□□□□ 0.49
SYNPOQ8N3V7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms