Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB43Q86YS6 AC099336.1-202ENST00000602961 463 ntBASIC17.12■□□□□ 0.33
RAB43Q86YS6 AC138894.3-201ENST00000603787 634 ntBASIC17.12■□□□□ 0.33
RAB43Q86YS6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.12■□□□□ 0.33
RAB43Q86YS6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB43Q86YS6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB43Q86YS6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB43Q86YS6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 MIR149-201ENST00000384879 89 ntBASIC17.11■□□□□ 0.33
RAB43Q86YS6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB43Q86YS6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB43Q86YS6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 AC246785.2-201ENST00000432512 513 ntBASIC17.1■□□□□ 0.33
RAB43Q86YS6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 AC011840.4-201ENST00000578471 627 ntBASIC17.1■□□□□ 0.33
RAB43Q86YS6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.1■□□□□ 0.33
RAB43Q86YS6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 KRT8P10-201ENST00000450021 1447 ntBASIC17.1■□□□□ 0.33
RAB43Q86YS6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB43Q86YS6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB43Q86YS6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms