Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC9.69□□□□□ -0.86
LCA10Q71F78 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC9.69□□□□□ -0.86
LCA10Q71F78 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
LCA10Q71F78 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC9.69□□□□□ -0.86
LCA10Q71F78 BRWD1-AS2-201ENST00000603064 1028 ntBASIC9.69□□□□□ -0.86
LCA10Q71F78 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC9.69□□□□□ -0.86
LCA10Q71F78 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
LCA10Q71F78 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LCA10Q71F78 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC9.69□□□□□ -0.86
LCA10Q71F78 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LCA10Q71F78 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LCA10Q71F78 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LCA10Q71F78 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LCA10Q71F78 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
LCA10Q71F78 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
LCA10Q71F78 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LCA10Q71F78 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC9.69□□□□□ -0.86
LCA10Q71F78 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LCA10Q71F78 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC9.68□□□□□ -0.86
LCA10Q71F78 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 GSN-206ENST00000394353 2311 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 AL161938.1-201ENST00000569833 2180 ntBASIC9.68□□□□□ -0.86
LCA10Q71F78 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC9.68□□□□□ -0.86
LCA10Q71F78 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC9.68□□□□□ -0.86
LCA10Q71F78 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
LCA10Q71F78 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC9.68□□□□□ -0.86
LCA10Q71F78 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 AC068338.2-201ENST00000563278 1430 ntBASIC9.68□□□□□ -0.86
LCA10Q71F78 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LCA10Q71F78 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC9.68□□□□□ -0.86
LCA10Q71F78 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 AC016769.1-201ENST00000409132 1010 ntBASIC9.68□□□□□ -0.86
LCA10Q71F78 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
LCA10Q71F78 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC9.68□□□□□ -0.86
LCA10Q71F78 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC9.68□□□□□ -0.86
LCA10Q71F78 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC9.68□□□□□ -0.86
LCA10Q71F78 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 CYP2T3P-201ENST00000601990 817 ntBASIC9.68□□□□□ -0.86
LCA10Q71F78 AC069236.1-201ENST00000604339 616 ntBASIC9.68□□□□□ -0.86
LCA10Q71F78 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
LCA10Q71F78 AC008694.1-202ENST00000636953 945 ntBASIC9.68□□□□□ -0.86
LCA10Q71F78 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LCA10Q71F78 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC9.68□□□□□ -0.86
LCA10Q71F78 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LCA10Q71F78 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
LCA10Q71F78 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
LCA10Q71F78 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC9.68□□□□□ -0.86
LCA10Q71F78 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LCA10Q71F78 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LCA10Q71F78 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.67□□□□□ -0.86
LCA10Q71F78 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LCA10Q71F78 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LCA10Q71F78 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LCA10Q71F78 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LCA10Q71F78 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC9.67□□□□□ -0.86
LCA10Q71F78 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
LCA10Q71F78 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LCA10Q71F78 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
LCA10Q71F78 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC9.67□□□□□ -0.86
LCA10Q71F78 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms