Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 HMGA1P5-201ENST00000412453 271 ntBASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 AP001094.4-201ENST00000579008 2176 ntBASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDZRN4Q6ZMN7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDZRN4Q6ZMN7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 LINC01126-201ENST00000623515 1646 ntBASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 KRT8P41-201ENST00000533985 1514 ntBASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 ARMC10P1-201ENST00000313754 855 ntBASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 AC104076.2-201ENST00000448912 469 ntBASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 DUX4L26-201ENST00000489078 1255 ntBASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDZRN4Q6ZMN7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN4Q6ZMN7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PDZRN4Q6ZMN7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.59■□□□□ 0.89
PDZRN4Q6ZMN7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PDZRN4Q6ZMN7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN4Q6ZMN7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.59■□□□□ 0.89
PDZRN4Q6ZMN7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
PDZRN4Q6ZMN7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN4Q6ZMN7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDZRN4Q6ZMN7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.59■□□□□ 0.89
PDZRN4Q6ZMN7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms