Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 KRT18P57-201ENST00000443599 1254 ntBASIC20.2■□□□□ 0.82
SHC4Q6S5L8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.2■□□□□ 0.82
SHC4Q6S5L8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 HYMAI.1-201ENST00000620949 238 ntBASIC20.19■□□□□ 0.82
SHC4Q6S5L8 AC009154.2-201ENST00000621177 724 ntBASIC20.19■□□□□ 0.82
SHC4Q6S5L8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SHC4Q6S5L8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 AL023806.1-201ENST00000603994 1649 ntBASIC20.18■□□□□ 0.82
SHC4Q6S5L8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 MIR662-201ENST00000384847 95 ntBASIC20.18■□□□□ 0.82
SHC4Q6S5L8 IGHGP-201ENST00000390555 1178 ntBASIC20.18■□□□□ 0.82
SHC4Q6S5L8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.18■□□□□ 0.82
SHC4Q6S5L8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.18■□□□□ 0.82
SHC4Q6S5L8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 HBZP1-201ENST00000354915 429 ntBASIC20.17■□□□□ 0.82
SHC4Q6S5L8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 AC211429.1-201ENST00000415277 523 ntBASIC20.17■□□□□ 0.82
SHC4Q6S5L8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 TSPY5P-201ENST00000426936 936 ntBASIC20.17■□□□□ 0.82
SHC4Q6S5L8 DDX43P3-201ENST00000441064 443 ntBASIC20.17■□□□□ 0.82
SHC4Q6S5L8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 AC116407.2-201ENST00000613639 860 ntBASIC20.17■□□□□ 0.82
SHC4Q6S5L8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 PCDHA12-202ENST00000613593 2588 ntBASIC20.17■□□□□ 0.82
SHC4Q6S5L8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SHC4Q6S5L8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms