Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
LRFN4Q6PJG9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 PVRIG2P-201ENST00000435460 978 ntBASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 AL356309.3-201ENST00000624132 1934 ntBASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.15■□□□□ 0.18
LRFN4Q6PJG9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 RASA4DP-201ENST00000460726 1199 ntBASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 AC034232.1-201ENST00000506026 1064 ntBASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 AC006011.2-201ENST00000621313 1158 ntBASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRFN4Q6PJG9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 AC046158.3-201ENST00000624947 2558 ntBASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 OR6D1P-203ENST00000641209 4860 ntBASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRFN4Q6PJG9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms